Biomax Genome Analysis
Biomax Genome Analysis ensures high-quality, comprehensive annotation of entire genomes. State-of-the-art methods with manual correction guarantee optimal gene prediction for prokaryotes or eukaryotes. Functional and structural classification is assigned. Your genome knowledge repository is cross-referenced to public and proprietary databases. Additional manual annotation expands and verifies the automatically generated data.
As recently published in Nature Biotechnology, Biomax participated in the Aspergillus niger genome project headed by DSM. Biomax provided bioinformatics analysis and manual annotation for the project.
References
Genome sequencing and analysis of the filamentous fungus Penicillium chrysogenum.
van den Berg MA, Albang R, Albermann K, Badger JH, Daran JM, Driessen AJ, Garcia-Estrada C, Fedorova ND, Harris DM, Heijne WH, Joardar V, Kiel JA, Kovalchuk A, Martin JF, Nierman WC, Nijland JG, Pronk JT, Roubos JA, van der Klei IJ, van Peij NN, Veenhuis M, von Doehren H, Wagner C, Wortman J, Bovenberg RA
Nature Biotechnology 26(10):1161-8 (2008) Abstract
Genome sequencing and analysis of the versatile cell factory Aspergillus niger CBS 513.88.
Pel HJ, de Winde JH, Archer DB, Dyer PS, Hofmann G, Schaap PJ, Turner G, de Vries RP, Albang R, Albermann K, Andersen MR, Bendtsen JD, Benen JA, van den Berg M, Breestraat S, Caddick MX, Contreras R, Cornell M, Coutinho PM, Danchin EG, Debets AJ, Dekker P, van Dijck PW, van Dijk A, Dijkhuizen L, Driessen AJ, d'Enfert C, Geysens S, Goosen C, Groot GS, de Groot PW, Guillemette T, Henrissat B, Herweijer M, van den Hombergh JP, van den Hondel CA, van der Heijden RT, van der Kaaij RM, Klis FM, Kools HJ, Kubicek CP, van Kuyk PA, Lauber J, Lu X, van der Maarel MJ, Meulenberg R, Menke H, Mortimer MA, Nielsen J, Oliver SG, Olsthoorn M, Pal K, van Peij NN, Ram AF, Rinas U, Roubos JA, Sagt CM, Schmoll M, Sun J, Ussery D, Varga J, Vervecken W, van de Vondervoort PJ, Wedler H, Woesten HA, Zeng AP, van Ooyen AJ, Visser J, Stam H.
Nature Biotechnology 25(2), 221-231 (2007) Abstract
How to become a uropathogen: comparative genomic analysis of extraintestinal pathogenic Escherichia coli strains.
Brzuszkiewicz E, Brueggemann H, Liesegang H, Emmerth M, Olschlaeger T, Nagy G, Albermann K, Wagner C, Buchrieser C, Emody L, Gottschalk G, Hacker J, Dobrindt U.
Proc Natl Acad Sci U S A 103(34):12879-84 (2006) Abstract
The Hansenula polymorpha (strain CBS4732) genome sequencing and analysis.
Ramezani-Rad M, Hollenberg CP, Lauber J, Wedler H, Griess E, Wagner C, Albermann K, Hani J, Piontek M, Dahlems U, Gellissen G.
FEMS Yeast Res 4(2):207-15 (2003) Abstract